Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900558.1_cds_XP_016450581.1_45016
CDS Infomation

[gene=LOC107775372] [db_xref=GeneID:107775372] [protein=chaperonin 60 subunit alpha 2, chloroplastic-like] [protein_id=XP_016450581.1] [location=join(76014..76067,76171..76345,76725..76846,76925..77132,77244..77389,77723..78029,78532..78782,79523..79723,80088..80375)] [gbkey=CDS]
Sequence

ATGTCACTGCCAATCTTTTCACCTTTATTCTCCCCTTTAAAGCTTTCTTTCTTGGAAGAT
AAAGGAAGGTGTAATTCGTGGGCGTTGAGGCAAAGCTTTGGGAAGAAGAAGATGATGGTG
GTGAGAGCTGGGCCAAAGAGAATAGCTTTTGATAATGAATGCAGAGAAGCTTTACTTTCT
GGTATCAATAAGATTGCTGATGCTGTTTCTGTCACCTTAGGACCTAAAGGGCGCAACGTA
GTTCTCTCTGAATCTGGTGTGCTGAAAGTAATTAATGATGGTGTTACCATAGCTCAAGCC
ATAGAACTTCCAGATACAATTGAAAATGCAGGAGTCACACTTATCAAGGAGGTTGCAACT
AAGACCAACAGTTTAGCTGGGGATGGTACAACTACTGCAATTGTTTTGGCTCGTGAGATG
GTCAAAGCTGGGTTGCTAGCTGTTGCTTTTGGGGCTAACCCTGTTTCTATGAAGAAAGGA
ATGGAGCAGACAGTAAGAAAGCTGGTCAAAATTTTGAAGAAGAAAAGCTATCCCATTAGA
GGAAATGATGATATTAAAGCTGTAGCTTCAATATCAGCTGGAAATGATGAGTTCATTGGC
AGTTTGATTGCTGAGGCAATTAAGAAGATTGGTCCTGATGGCGTCATATGTATTGAGTCT
TCCTCATCAGCTGAAACCTCAGTCATGGTTGAAGAAGGAATGAAGATTGACAAGGGGTAC
ATGTCACCCCATTTCATCAACAATCCCAACAAATCTATAGTAGAGTTTGAAAATGCCAAA
GTTCTGGTAACCGATCAAAAGATATCTTCTGTCAAAGAAATTGTTCCTTTGCTAGAGAAG
GCCACACAGCTGAGTGTGCCACTGCTGATTTTTGCTGAGGATATTTCAAGCCAAGTGCTA
GAAACACTTGTCATTAACAAGATGCAAGGAATGCTTAATGTTGCTGTTGTGAAATGTCCA
GGATTTGGAGAAGGAAAGAAAGCTTTATTGCAAGACATTGCCCTATTGACAGGTGCTGAT
TTTCTTGCTGGAGACTTAGGCCTGAATCTTGAAGGTGCAACCTCAGATCAGCTTGGTATT
GCTCGGAAAATAACAATAACAAGCAATTCTACGACCATCGTGGCTGACCCCTCCACGAAA
GCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAGTAAA
TATTTGTCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCCATATTG
AAGGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCA
AAAAGTGCTACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGCGGCGGTGCCACTTTT
ATTCATCTCTCTGAGCACGTGCCCTTCATAAAAGAATTGTTTCAAGATCCAGATGAGCAG
ATCGGTGCTGACATAATAGGAATGGCACTTCTTGCACCAGCAAAGCTAATAGCCGCAAAT
GCAGGAGTGGATGGAGATATAGTTGTGGAAGAAGTTAGAGGTTGTGACTGGCAAATAGGG
TATAATGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGGGTTATTGATCCTTGT
CGTGTTTCAAGGTGTGCTCTTCAGAATGCTGTCTCTGTTGCTGGTATAGTCCTAACTACT
CAAGCAATAATGGTAGAGAAAACCAAGGAGCCTAAACCGCTTGTTCCTCAGATTCCTGGT
ATAACTCCTTAA

Peptide Sequence

PEP ID

XP_016450581.1
PEP Infomation

PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MSLPIFSPLFSPLKLSFLEDKGRCNSWALRQSFGKKKMMVVRAGPKRIAFDNECREALLS
GINKIADAVSVTLGPKGRNVVLSESGVLKVINDGVTIAQAIELPDTIENAGVTLIKEVAT
KTNSLAGDGTTTAIVLAREMVKAGLLAVAFGANPVSMKKGMEQTVRKLVKILKKKSYPIR
GNDDIKAVASISAGNDEFIGSLIAEAIKKIGPDGVICIESSSSAETSVMVEEGMKIDKGY
MSPHFINNPNKSIVEFENAKVLVTDQKISSVKEIVPLLEKATQLSVPLLIFAEDISSQVL
ETLVINKMQGMLNVAVVKCPGFGEGKKALLQDIALLTGADFLAGDLGLNLEGATSDQLGI
ARKITITSNSTTIVADPSTKAEIQARIMQIKKDLAETDSKYLSEKLSQRIAKLSGGVAIL
KVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGGATFIHLSEHVPFIKELFQDPDEQ
IGADIIGMALLAPAKLIAANAGVDGDIVVEEVRGCDWQIGYNAMTGRYEDLLASGVIDPC
RVSRCALQNAVSVAGIVLTTQAIMVEKTKEPKPLVPQIPGITP

Transcript Sequence

Gene sequence data has not been registered.